Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S1946 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430911 bp
Thymine Count
1429073 bp
Guanine Count
1376391 bp
Cytosine Count
1379663 bp
Genome Length
5616038 bp
Protein-coding Genes
4513 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C3B51_00265 | Not Available | Positive | 82748 - 83797 | 38990.0 |
| cytochrome-c peroxidase | C3B51_00270 | Not Available | Positive | 84087 - 85115 | 37992.1 |
| hypothetical protein | C3B51_00275 | Not Available | Positive | 85112 - 87445 | 86879.5 |
| duf2237 domain-containing protein | C3B51_00280 | Not Available | Negative | 87661 - 88017 | 12781.2 |
| hypothetical protein | C3B51_00285 | Not Available | Positive | 88267 - 88920 | 25463.1 |
| eama family transporter | C3B51_00290 | Not Available | Negative | 89008 - 89898 | 31270.3 |
| sodium:proton antiporter | C3B51_00295 | Not Available | Positive | 90151 - 91533 | 48704.0 |
| protein/domain typically associated with flavoprotein oxygenase, dim6/ntab family protein | C3B51_00300 | Not Available | Negative | 91644 - 92258 | 22399.7 |
| histone deacetylase | C3B51_00305 | Not Available | Positive | 92363 - 93286 | 34384.2 |
| hypothetical protein | C3B51_00310 | Not Available | Positive | 93368 - 93880 | 18543.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
