Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | strain S1946 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1430911 bp
Thymine Count
1429073 bp
Guanine Count
1376391 bp
Cytosine Count
1379663 bp
Genome Length
5616038 bp
Protein-coding Genes
4513 genes
Non-Coding Genes
161 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutarate dehydrogenase e1 component | C3B51_04820 | Not Available | Negative | 1239608 - 1242421 | 105097.0 |
| succinate dehydrogenase iron-sulfur subunit | C3B51_04825 | Not Available | Negative | 1242505 - 1243224 | 26711.3 |
| succinate dehydrogenase flavoprotein subunit | C3B51_04830 | Not Available | Negative | 1243235 - 1245007 | 64763.4 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | C3B51_04835 | Not Available | Negative | 1245008 - 1245355 | 12773.0 |
| succinate dehydrogenase, cytochrome b556 subunit | C3B51_04840 | Not Available | Negative | 1245346 - 1245723 | 13946.2 |
| citrate synthase | C3B51_04845 | Not Available | Positive | 1246135 - 1247421 | 47824.3 |
| cysteine desulfurase csda | C3B51_04850 | Not Available | Positive | 1247552 - 1248775 | 44415.6 |
| sufe protein | C3B51_04855 | Not Available | Positive | 1248778 - 1249185 | 15154.6 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | C3B51_04860 | Not Available | Negative | 1249208 - 1250002 | 28681.3 |
| tigr01621 family pseudouridine synthase | C3B51_04865 | Not Available | Negative | 1250004 - 1250669 | 24599.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
