Pseudoalteromonas phenolica strain S3898

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas phenolica strain S3898 is a rod-shaped bacterium characterized by a single replicon. This strain belongs to the genus Pseudoalteromonas, which is known for its diverse metabolic capabilities and ecological significance in marine environments. The genomic sequence of P. phenolica strain S3898 is cataloged under the accession number PPSX00000000.1. This access point provides researchers with a reference for further studies related to its genetic makeup and functional attributes. The single replicon indicates a relatively streamlined genomic organization, which may influence its adaptability and survival in various ecological contexts. Pseudoalteromonas species are often associated with marine habitats, where they play crucial roles in biogeochemical cycles and can interact with a variety of marine organisms. The ecological implications of such interactions, particularly regarding nutrient cycling and microbial community dynamics, are significant. This strain's rod shape may confer advantages in motility and nutrient uptake within aquatic environments. Overall, Pseudoalteromonas phenolica strain S3898 exemplifies the unique adaptations of marine bacteria and their potential contributions to ecosystem functioning. Understanding its traits and behavior could provide insights into the broader roles of microbial communities in oceanic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas phenolica
Strainstrain S3898

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas phenolica strain S3898 S3898_contig_221, whole

Gene Summary

Adenine Count

1385186 bp

Thymine Count

1376804 bp

Guanine Count

921740 bp

Cytosine Count

944108 bp

Genome Length

4627838 bp

Protein-coding Genes

4053 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pseudouridine synthaseC1E23_19530Not AvailableNegative4305773 - 430641424550.7
nadp-dependent isocitrate dehydrogenaseC1E23_19535Not AvailableNegative4306533 - 430875580321.7
cold shock domain protein cspdC1E23_19540Not AvailableNegative4309067 - 43092857907.36
atp-dependent clp protease adapter clpsC1E23_19545Not AvailablePositive4309487 - 430980412087.4
atp-dependent clp protease atp-binding subunit clpaC1E23_19550Not AvailablePositive4309834 - 431210184031.5
translation initiation factor if-1C1E23_19555Not AvailableNegative4312253 - 43124718235.2
arginyltransferaseC1E23_19560Not AvailableNegative4312567 - 431327427692.1
leucyl/phenylalanyl-trna--protein transferaseC1E23_19565Not AvailableNegative4313267 - 431398627294.0
thioredoxin-disulfide reductaseC1E23_19570Not AvailableNegative4314066 - 431501633981.2
cdp-diacylglycerol--serine o-phosphatidyltransferaseC1E23_19575Not AvailablePositive4315269 - 431659450779.6

Displaying genes 3841 – 3850 of 4164 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.