Pseudoalteromonas phenolica strain S3898

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas phenolica strain S3898 is a rod-shaped bacterium characterized by a single replicon. This strain belongs to the genus Pseudoalteromonas, which is known for its diverse metabolic capabilities and ecological significance in marine environments. The genomic sequence of P. phenolica strain S3898 is cataloged under the accession number PPSX00000000.1. This access point provides researchers with a reference for further studies related to its genetic makeup and functional attributes. The single replicon indicates a relatively streamlined genomic organization, which may influence its adaptability and survival in various ecological contexts. Pseudoalteromonas species are often associated with marine habitats, where they play crucial roles in biogeochemical cycles and can interact with a variety of marine organisms. The ecological implications of such interactions, particularly regarding nutrient cycling and microbial community dynamics, are significant. This strain's rod shape may confer advantages in motility and nutrient uptake within aquatic environments. Overall, Pseudoalteromonas phenolica strain S3898 exemplifies the unique adaptations of marine bacteria and their potential contributions to ecosystem functioning. Understanding its traits and behavior could provide insights into the broader roles of microbial communities in oceanic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas phenolica
Strainstrain S3898

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas phenolica strain S3898 S3898_contig_221, whole

Gene Summary

Adenine Count

1385186 bp

Thymine Count

1376804 bp

Guanine Count

921740 bp

Cytosine Count

944108 bp

Genome Length

4627838 bp

Protein-coding Genes

4053 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dephospho-coa kinaseC1E23_05705Not AvailableNegative1227274 - 122788522496.1
prepilin peptidaseC1E23_05710Not AvailableNegative1227904 - 122879432660.7
type ii secretion system protein fC1E23_05715Not AvailableNegative1228830 - 123006544648.2
prepilin-type cleavage/methylation domain-containing proteinC1E23_05720Not AvailableNegative1230117 - 123061716968.2
nicotinate-nucleotide diphosphorylase (carboxylating)C1E23_05725Not AvailableNegative1231008 - 123187431029.8
1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampdC1E23_05730Not AvailablePositive1232003 - 123256020896.7
regulatory signaling modulator protein ampeC1E23_05735Not AvailablePositive1232568 - 123341931870.1
pilz domain-containing proteinC1E23_05740Not AvailableNegative1233449 - 123595095766.4
dna repair protein radaC1E23_05745Not AvailablePositive1236157 - 123752748996.4
hypothetical proteinC1E23_05750Not AvailablePositive1237543 - 123846633794.3

Displaying genes 1131 – 1140 of 4164 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.