Roseibium marinum strain DSM 17023

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Roseibium

Description

Roseibium marinum strain DSM 17023 is a Gram-negative bacterium that possesses a single replicon. This strain is cataloged under the accession number PPCN00000000.1. As a member of the Roseibium genus, it is characterized by its unique morphological and physiological traits typical of marine bacteria. Gram-negative bacteria, including Roseibium marinum, are known for their outer membrane, which contains lipopolysaccharides. This structural feature contributes to their adaptability in various environments, particularly in aquatic ecosystems. The single replicon indicates a streamlined genetic organization, which could be advantageous for its survival and reproduction in marine habitats. The ecological significance of Roseibium marinum lies in its potential role in nutrient cycling within marine environments. As a member of the microbial community, it may contribute to processes such as organic matter decomposition and the cycling of essential nutrients, thereby influencing the overall health and productivity of marine ecosystems. In summary, Roseibium marinum strain DSM 17023 is a Gram-negative bacterium with a single replicon, cataloged under the accession PPCN00000000.1. Its ecological role in marine environments underscores the importance of such microorganisms in maintaining the balance of nutrient cycles within these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusRoseibium
SpeciesRoseibium marinum
Strainstrain DSM 17023

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseibium marinum strain DSM 17023 Ga0181000_129, whole genome

Gene Summary

Adenine Count

1197970 bp

Thymine Count

1204262 bp

Guanine Count

1833080 bp

Cytosine Count

1821870 bp

Genome Length

6057182 bp

Protein-coding Genes

5424 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pqq-dependent catabolism-associated beta-propeller proteinCLV41_11965Not AvailableNegative5797460 - 579847937223.2
abc transporter substrate binding protein (pqq-dependent alcohol dehydrogenase system)CLV41_11966Not AvailableNegative5798490 - 579969844461.8
uncharacterized protein duf2380CLV41_11967Not AvailablePositive5799821 - 580030917827.7
polyketide cyclase/dehydrase/lipid transport proteinCLV41_11968Not AvailablePositive5800317 - 580085919438.1
yvtn family beta-propeller proteinCLV41_11969Not AvailablePositive5800828 - 580185336009.5
sulfur-oxidizing protein soxyCLV41_11970Not AvailablePositive5801826 - 580267130182.9
pqq-dependent catabolism-associated cxxcw motif proteinCLV41_11971Not AvailableNegative5802852 - 580343921526.2
quinoprotein dehydrogenase-associated probable abc transporter substrate-binding proteinCLV41_11972Not AvailableNegative5803442 - 580437734008.9
methanol metabolism-related c-type cytochromeCLV41_11973Not AvailableNegative5804358 - 580484617917.7
pqq-dependent dehydrogenase (methanol/ethanol family)CLV41_11974Not AvailableNegative5805032 - 580683165290.4

Displaying genes 5241 – 5250 of 5484 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.