Roseibium marinum strain DSM 17023

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Roseibium

Description

Roseibium marinum strain DSM 17023 is a Gram-negative bacterium that possesses a single replicon. This strain is cataloged under the accession number PPCN00000000.1. As a member of the Roseibium genus, it is characterized by its unique morphological and physiological traits typical of marine bacteria. Gram-negative bacteria, including Roseibium marinum, are known for their outer membrane, which contains lipopolysaccharides. This structural feature contributes to their adaptability in various environments, particularly in aquatic ecosystems. The single replicon indicates a streamlined genetic organization, which could be advantageous for its survival and reproduction in marine habitats. The ecological significance of Roseibium marinum lies in its potential role in nutrient cycling within marine environments. As a member of the microbial community, it may contribute to processes such as organic matter decomposition and the cycling of essential nutrients, thereby influencing the overall health and productivity of marine ecosystems. In summary, Roseibium marinum strain DSM 17023 is a Gram-negative bacterium with a single replicon, cataloged under the accession PPCN00000000.1. Its ecological role in marine environments underscores the importance of such microorganisms in maintaining the balance of nutrient cycles within these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusRoseibium
SpeciesRoseibium marinum
Strainstrain DSM 17023

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseibium marinum strain DSM 17023 Ga0181000_129, whole genome

Gene Summary

Adenine Count

1197970 bp

Thymine Count

1204262 bp

Guanine Count

1833080 bp

Cytosine Count

1821870 bp

Genome Length

6057182 bp

Protein-coding Genes

5424 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c1CLV41_108240Not AvailableNegative4001516 - 400240032550.4
ubiquinol-cytochrome c reductase cytochrome b subunitCLV41_108241Not AvailableNegative4002431 - 400369647377.4
ubiquinol-cytochrome c reductase iron-sulfur subunitCLV41_108242Not AvailableNegative4003722 - 400428219833.5
atp-binding cassette subfamily b multidrug efflux pumpCLV41_108243Not AvailableNegative4004594 - 400643268590.6
hypothetical proteinCLV41_108244Not AvailableNegative4006435 - 400686315666.5
pas domain s-box-containing protein/diguanylate cyclase (ggdef)-like proteinCLV41_108245Not AvailableNegative4007241 - 400910368545.0
putative membrane proteinCLV41_108246Not AvailableNegative4009430 - 400983114525.8
atp-binding cassette subfamily b multidrug efflux pumpCLV41_108247Not AvailableNegative4009965 - 401181867967.0
trna (cytidine/uridine-2'-o-)-methyltransferaseCLV41_108248Not AvailablePositive4011985 - 401245517074.6
coproporphyrinogen oxidaseCLV41_108249Not AvailablePositive4012501 - 401342734592.5

Displaying genes 3661 – 3670 of 5484 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.