Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Roseibium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Roseibium |
| Species | Roseibium marinum |
| Strain | strain DSM 17023 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1197970 bp
Thymine Count
1204262 bp
Guanine Count
1833080 bp
Cytosine Count
1821870 bp
Genome Length
6057182 bp
Protein-coding Genes
5424 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane fusion protein (multidrug efflux system) | CLV41_10565 | Not Available | Negative | 2838505 - 2839653 | 40694.1 |
| gntr family transcriptional regulator of vanillate catabolism | CLV41_10566 | Not Available | Positive | 2840420 - 2841145 | 26424.7 |
| vanillate/3-o-methylgallate o-demethylase | CLV41_10567 | Not Available | Positive | 2841326 - 2842729 | 52697.4 |
| trap-type c4-dicarboxylate transport system substrate-binding protein | CLV41_10568 | Not Available | Positive | 2843806 - 2844813 | 35377.0 |
| trap-type c4-dicarboxylate transport system permease small subunit | CLV41_10569 | Not Available | Positive | 2844821 - 2845333 | 18317.1 |
| tripartite atp-independent transporter dctm subunit | CLV41_10570 | Not Available | Positive | 2845330 - 2846634 | 44947.1 |
| catechol 2,3-dioxygenase | CLV41_10571 | Not Available | Positive | 2846711 - 2847673 | 36232.3 |
| 4-oxalomesaconate hydratase | CLV41_10572 | Not Available | Positive | 2847683 - 2848414 | 27734.7 |
| 4-hydroxy-4-methyl-2-oxoglutarate aldolase | CLV41_10573 | Not Available | Positive | 2848414 - 2849106 | 24335.4 |
| 4-oxalomesaconate tautomerase | CLV41_10574 | Not Available | Positive | 2849120 - 2850151 | 35862.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
