Vibrio agarivorans strain CAIM 1911

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio agarivorans strain CAIM 1911 is an aerobic bacterium, indicating that it requires oxygen for its growth and metabolism. This characteristic places it within a group of microorganisms that thrive in oxygen-rich environments. The strain has been characterized with a single replicon, suggesting a streamlined genomic structure that may facilitate efficient replication and gene expression. The genomic data for Vibrio agarivorans strain CAIM 1911 is accessible under the accession number POWH00000000.1, which allows for further exploration of its genetic and biochemical properties. This particular strain, as a member of the Vibrio genus, may possess traits associated with the degradation of complex organic compounds, particularly in marine environments where it is commonly found. From an ecological perspective, the aerobic nature of Vibrio agarivorans strain CAIM 1911 may play a significant role in nutrient cycling within its habitat. Aerobic bacteria are crucial for the breakdown of organic matter, contributing to the recycling of nutrients in aquatic ecosystems. Therefore, the presence of Vibrio agarivorans strain CAIM 1911 may enhance the microbial diversity and functionality of its environment, supporting overall ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio agarivorans
Strainstrain CAIM 1911

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio agarivorans strain CAIM 1911
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio agarivorans strain CAIM 1911 contig_998, whole genome

Gene Summary

Adenine Count

1312542 bp

Thymine Count

1317414 bp

Guanine Count

933931 bp

Cytosine Count

935935 bp

Genome Length

4500445 bp

Protein-coding Genes

4126 genes

Non-Coding Genes

153 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flap endonuclease xniC1141_03800Not AvailablePositive838628 - 83939828828.4
dna/rna non-specific endonucleaseC1141_03805Not AvailablePositive839791 - 84056429393.5
23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmmC1141_03810Not AvailableNegative840688 - 84177941686.7
duf423 domain-containing proteinC1141_03815Not AvailableNegative841776 - 84217414367.2
alpha/beta hydrolaseC1141_03820Not AvailableNegative842164 - 84278722759.3
transcriptional regulator gcvaC1141_03825Not AvailableNegative842768 - 84368834541.4
trna 4-thiouridine(8) synthase thiiC1141_03830Not AvailableNegative844162 - 84561054630.8
flagellar motor protein motbC1141_03835Not AvailableNegative846083 - 84702735254.0
flagellar motor protein pomaC1141_03840Not AvailableNegative847040 - 84780127278.8
exodeoxyribonuclease vii small subunitC1141_03845Not AvailablePositive848070 - 8483128856.29

Displaying genes 841 – 850 of 4279 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.