Vibrio agarivorans strain CAIM 1911

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio agarivorans strain CAIM 1911 is an aerobic bacterium, indicating that it requires oxygen for its growth and metabolism. This characteristic places it within a group of microorganisms that thrive in oxygen-rich environments. The strain has been characterized with a single replicon, suggesting a streamlined genomic structure that may facilitate efficient replication and gene expression. The genomic data for Vibrio agarivorans strain CAIM 1911 is accessible under the accession number POWH00000000.1, which allows for further exploration of its genetic and biochemical properties. This particular strain, as a member of the Vibrio genus, may possess traits associated with the degradation of complex organic compounds, particularly in marine environments where it is commonly found. From an ecological perspective, the aerobic nature of Vibrio agarivorans strain CAIM 1911 may play a significant role in nutrient cycling within its habitat. Aerobic bacteria are crucial for the breakdown of organic matter, contributing to the recycling of nutrients in aquatic ecosystems. Therefore, the presence of Vibrio agarivorans strain CAIM 1911 may enhance the microbial diversity and functionality of its environment, supporting overall ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio agarivorans
Strainstrain CAIM 1911

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio agarivorans strain CAIM 1911
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio agarivorans strain CAIM 1911 contig_998, whole genome

Gene Summary

Adenine Count

1312542 bp

Thymine Count

1317414 bp

Guanine Count

933931 bp

Cytosine Count

935935 bp

Genome Length

4500445 bp

Protein-coding Genes

4126 genes

Non-Coding Genes

153 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
escf/yscf/hrpa family type iii secretion system needle major subunitC1141_13670Not AvailablePositive2987345 - 29876029353.98
yscg family type iii secretion proteinC1141_13675Not AvailablePositive2987606 - 298796213044.9
type iii export proteinC1141_13680Not AvailablePositive2987962 - 298859423861.2
esci/ysci/hrpb family type iii secretion system inner rod proteinC1141_13685Not AvailablePositive2988603 - 298894712828.1
escj/yscj/hrcj family type iii secretion inner membrane ring proteinC1141_13690Not AvailablePositive2989044 - 298979027407.4
type iii secretion proteinC1141_13695Not AvailablePositive2989777 - 299044826095.8
hrpe/yscl family type iii secretion apparatus proteinC1141_13700Not AvailablePositive2990427 - 299104723090.6
arac family transcriptional regulatorC1141_13705Not AvailablePositive2991401 - 299200922869.0
hypothetical proteinC1141_13710Not AvailableNegative2992060 - 299252118035.0
nicotinate-nicotinamide nucleotide adenylyltransferaseC1141_13715Not AvailableNegative2992574 - 299309519673.7

Displaying genes 2681 – 2690 of 4279 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.