Pseudomonas gingeri NCPPB 3146 = LMG 5327

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas gingeri NCPPB 3146, also designated as LMG 5327, is a bacterial strain characterized by possessing a single replicon. This trait is significant as it may indicate a streamlined genomic structure, which can influence its adaptability and metabolic capabilities within its ecological niche. The strain is cataloged under the accession number POWE00000000.1, providing a reference for researchers to access its genomic information. While specific metabolic or ecological functions of Pseudomonas gingeri are not detailed, the genus Pseudomonas is well-known for its versatility in various environments, including soil and water. Members of this genus often play crucial roles in biogeochemical cycles and can exhibit beneficial traits, such as plant growth promotion and bioremediation potential. Overall, the characterization of Pseudomonas gingeri NCPPB 3146 = LMG 5327 underscores the importance of studying microbial diversity. Understanding the genomic features of such strains can contribute to insights into their ecological roles and potential applications in agriculture and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas gingeri
StrainNCPPB 3146 = LMG 5327

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas gingeri NCPPB 3146 = LMG 5327
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas gingeri NCPPB 3146 = LMG 5327 contig193, whole genome

Gene Summary

Adenine Count

1423580 bp

Thymine Count

1432393 bp

Guanine Count

2403283 bp

Cytosine Count

2384590 bp

Genome Length

7643846 bp

Protein-coding Genes

6770 genes

Non-Coding Genes

158 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii toxin-antitoxin system hicb family antitoxinCCU68_26300Not AvailablePositive5755275 - 575567614749.3
hypothetical proteinCCU68_26310Not AvailableNegative5755929 - 57561538215.08
fructose-bisphosphate aldolaseCCU68_26315Not AvailablePositive5756660 - 575695611045.3
tryptophan synthase subunit alphaCCU68_26320Not AvailableNegative5757039 - 575765722098.5
tryptophan synthase subunit betaCCU68_26325Not AvailableNegative5757657 - 575887744150.8
lysr family transcriptional regulatorCCU68_26330Not AvailablePositive5758989 - 575988532568.1
duf883 domain-containing proteinCCU68_26340Not AvailableNegative5760080 - 576040611777.9
dodecin domain-containing proteinCCU68_26345Not AvailablePositive5760558 - 57607737944.4
duf1161 domain-containing proteinCCU68_26350Not AvailablePositive5760908 - 57611418018.8
llm class flavin-dependent oxidoreductaseCCU68_26355Not AvailableNegative5761203 - 576220436651.1

Displaying genes 5231 – 5240 of 6928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.