Pseudomonas gingeri NCPPB 3146 = LMG 5327

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas gingeri NCPPB 3146, also designated as LMG 5327, is a bacterial strain characterized by possessing a single replicon. This trait is significant as it may indicate a streamlined genomic structure, which can influence its adaptability and metabolic capabilities within its ecological niche. The strain is cataloged under the accession number POWE00000000.1, providing a reference for researchers to access its genomic information. While specific metabolic or ecological functions of Pseudomonas gingeri are not detailed, the genus Pseudomonas is well-known for its versatility in various environments, including soil and water. Members of this genus often play crucial roles in biogeochemical cycles and can exhibit beneficial traits, such as plant growth promotion and bioremediation potential. Overall, the characterization of Pseudomonas gingeri NCPPB 3146 = LMG 5327 underscores the importance of studying microbial diversity. Understanding the genomic features of such strains can contribute to insights into their ecological roles and potential applications in agriculture and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas gingeri
StrainNCPPB 3146 = LMG 5327

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas gingeri NCPPB 3146 = LMG 5327
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas gingeri NCPPB 3146 = LMG 5327 contig193, whole genome

Gene Summary

Adenine Count

1423580 bp

Thymine Count

1432393 bp

Guanine Count

2403283 bp

Cytosine Count

2384590 bp

Genome Length

7643846 bp

Protein-coding Genes

6770 genes

Non-Coding Genes

158 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
esteraseCCU68_24805Not AvailableNegative5464078 - 546452116018.1
amp-binding proteinCCU68_24810Not AvailableNegative5464546 - 546620160361.1
pentapeptide repeat-containing proteinCCU68_24815Not AvailablePositive5466547 - 546721523973.2
phosphohistidine phosphatase sixaCCU68_24820Not AvailableNegative5467258 - 546770716409.7
duf4389 domain-containing proteinCCU68_24825Not AvailableNegative5467704 - 546803912535.2
nad(p)h-dependent glycerol-3-phosphate dehydrogenaseCCU68_24830Not AvailableNegative5468061 - 546908636292.1
tonb-dependent receptorCCU68_24835Not AvailablePositive5469287 - 547141379723.7
abc transporter substrate-binding proteinCCU68_24840Not AvailablePositive5471437 - 547235133260.9
hybrid sensor histidine kinase/response regulatorCCU68_24845Not AvailablePositive5472348 - 547424369686.8
beta-hydroxydecanoyl-acp dehydrataseCCU68_24850Not AvailablePositive5474481 - 547499618714.7

Displaying genes 4941 – 4950 of 6928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.