Pseudomonas gingeri NCPPB 3146 = LMG 5327

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas gingeri NCPPB 3146, also designated as LMG 5327, is a bacterial strain characterized by possessing a single replicon. This trait is significant as it may indicate a streamlined genomic structure, which can influence its adaptability and metabolic capabilities within its ecological niche. The strain is cataloged under the accession number POWE00000000.1, providing a reference for researchers to access its genomic information. While specific metabolic or ecological functions of Pseudomonas gingeri are not detailed, the genus Pseudomonas is well-known for its versatility in various environments, including soil and water. Members of this genus often play crucial roles in biogeochemical cycles and can exhibit beneficial traits, such as plant growth promotion and bioremediation potential. Overall, the characterization of Pseudomonas gingeri NCPPB 3146 = LMG 5327 underscores the importance of studying microbial diversity. Understanding the genomic features of such strains can contribute to insights into their ecological roles and potential applications in agriculture and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas gingeri
StrainNCPPB 3146 = LMG 5327

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas gingeri NCPPB 3146 = LMG 5327
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas gingeri NCPPB 3146 = LMG 5327 contig193, whole genome

Gene Summary

Adenine Count

1423580 bp

Thymine Count

1432393 bp

Guanine Count

2403283 bp

Cytosine Count

2384590 bp

Genome Length

7643846 bp

Protein-coding Genes

6770 genes

Non-Coding Genes

158 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dihydrolipoyllysine-residue succinyltransferaseCCU68_17025Not AvailableNegative3787929 - 378915242149.9
2-oxoglutarate dehydrogenase e1 componentCCU68_17030Not AvailableNegative3789194 - 3792025106585.0
succinate dehydrogenase iron-sulfur subunitCCU68_17035Not AvailableNegative3792317 - 379302126055.6
succinate dehydrogenase flavoprotein subunitCCU68_17040Not AvailableNegative3793033 - 379480563448.4
succinate dehydrogenase, hydrophobic membrane anchor proteinCCU68_17045Not AvailableNegative3794809 - 379517713676.0
succinate dehydrogenase, cytochrome b556 subunitCCU68_17050Not AvailableNegative3795171 - 379554513398.0
citrate (si)-synthaseCCU68_17055Not AvailablePositive3795911 - 379720047716.8
hypothetical proteinCCU68_17060Not AvailableNegative3797209 - 37974186921.56
cation acetate symporterCCU68_17065Not AvailableNegative3797614 - 379927258760.2
duf485 domain-containing proteinCCU68_17070Not AvailableNegative3799269 - 379958011432.1

Displaying genes 3481 – 3490 of 6928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.