Pseudomonas gingeri NCPPB 3146 = LMG 5327

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas gingeri NCPPB 3146, also designated as LMG 5327, is a bacterial strain characterized by possessing a single replicon. This trait is significant as it may indicate a streamlined genomic structure, which can influence its adaptability and metabolic capabilities within its ecological niche. The strain is cataloged under the accession number POWE00000000.1, providing a reference for researchers to access its genomic information. While specific metabolic or ecological functions of Pseudomonas gingeri are not detailed, the genus Pseudomonas is well-known for its versatility in various environments, including soil and water. Members of this genus often play crucial roles in biogeochemical cycles and can exhibit beneficial traits, such as plant growth promotion and bioremediation potential. Overall, the characterization of Pseudomonas gingeri NCPPB 3146 = LMG 5327 underscores the importance of studying microbial diversity. Understanding the genomic features of such strains can contribute to insights into their ecological roles and potential applications in agriculture and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas gingeri
StrainNCPPB 3146 = LMG 5327

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas gingeri NCPPB 3146 = LMG 5327
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas gingeri NCPPB 3146 = LMG 5327 contig193, whole genome

Gene Summary

Adenine Count

1423580 bp

Thymine Count

1432393 bp

Guanine Count

2403283 bp

Cytosine Count

2384590 bp

Genome Length

7643846 bp

Protein-coding Genes

6770 genes

Non-Coding Genes

158 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane porin, oprd familyCCU68_09600Not AvailableNegative2180951 - 218223746388.0
tonb-dependent siderophore receptorCCU68_09605Not AvailablePositive2182688 - 218478176768.4
hypothetical proteinCCU68_09610Not AvailableNegative2184844 - 21850447264.68
agmatine deiminaseCCU68_09615Not AvailableNegative2185291 - 218639740654.9
n-carbamoylputrescine amidaseCCU68_09620Not AvailableNegative2186403 - 218728132796.6
hypothetical proteinCCU68_09625Not AvailableNegative2187495 - 2190407105943.0
dtdp-glucose 4,6-dehydrataseCCU68_09630Not AvailablePositive2190593 - 219167540123.4
glucose-1-phosphate thymidylyltransferaseCCU68_09635Not AvailablePositive2191672 - 219254432296.5
dtdp-4-dehydrorhamnose 3,5-epimeraseCCU68_09640Not AvailablePositive2192541 - 219308620592.1
dtdp-4-dehydrorhamnose reductaseCCU68_09645Not AvailablePositive2193083 - 219396732202.0

Displaying genes 2021 – 2030 of 6928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.