Oligella urethralis strain UMB0345

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Oligella

Description

Oligella urethralis strain UMB0345 is a Gram-negative, rod-shaped bacterium. This strain is characterized by possessing a single replicon, indicating a relatively simple genomic structure. The genomic information for Oligella urethralis strain UMB0345 is accessible through the accession number PNGK00000000.1. As a member of the genus Oligella, this strain is noteworthy for its potential role in human health and disease, particularly in urinary tract environments, given its urethralis designation. The Gram-negative nature of the organism suggests that it possesses an outer membrane containing lipopolysaccharides, which may influence its interactions with the host and other microorganisms. Understanding the specific traits of Oligella urethralis strain UMB0345 can provide insights into its ecological role within the human microbiome. The presence of such bacteria in the urethral region may contribute to the microbial diversity and stability of this niche, potentially influencing the susceptibility to infections or the overall health of the urinary tract. Further studies on its behavior and interactions in its natural habitat could shed light on its biological significance and its responses to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusOligella
SpeciesOligella urethralis
Strainstrain UMB0345

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oligella urethralis strain UMB0345 .21837_8_92.74, whole genome

Gene Summary

Adenine Count

670725 bp

Thymine Count

691214 bp

Guanine Count

600285 bp

Cytosine Count

567265 bp

Genome Length

2529504 bp

Protein-coding Genes

2271 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
selenocysteine-specific translation elongation factorCJ230_04805Not AvailableNegative1015161 - 101709871077.7
l-seryl-trna(sec) selenium transferaseCJ230_04810Not AvailableNegative1017102 - 101853252288.8
formate dehydrogenase accessory protein fdheCJ230_04815Not AvailableNegative1018549 - 101949334594.4
formate dehydrogenase-n subunit alphaCJ230_04820Not AvailableNegative1019580 - 102201291255.3
sulfate abc transporter substrate-binding proteinCJ230_04825Not AvailableNegative1022061 - 102265121538.0
nickel transporterCJ230_04830Not AvailableNegative1022840 - 102355326198.4
amino acid abc transporter permeaseCJ230_04835Not AvailableNegative1023546 - 102425325560.7
amino acid abc transporter substrate-binding proteinCJ230_04840Not AvailablePositive1024463 - 102524828767.9
mfs transporterCJ230_04845Not AvailablePositive1025376 - 102661444600.8
mfs transporterCJ230_04850Not AvailablePositive1026667 - 102790544778.9

Displaying genes 951 – 960 of 2323 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.