Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i glyceraldehyde-3-phosphate dehydrogenase | CJ240_04805 | Not Available | Negative | 1094800 - 1095807 | 36216.1 |
| dna-binding protein whia | CJ240_04810 | Not Available | Negative | 1096029 - 1097006 | 35020.1 |
| hypothetical protein | CJ240_04815 | Not Available | Negative | 1097068 - 1098066 | 35821.0 |
| rnase adapter rapz | CJ240_04820 | Not Available | Negative | 1098063 - 1099016 | 35598.8 |
| excinuclease abc subunit c | CJ240_04825 | Not Available | Negative | 1099046 - 1101007 | 73857.5 |
| nadp-specific glutamate dehydrogenase | CJ240_04830 | Not Available | Positive | 1101274 - 1102611 | 48636.7 |
| hypothetical protein | CJ240_04835 | Not Available | Negative | 1102639 - 1103370 | 27867.2 |
| nif3-like dinuclear metal center hexameric protein | CJ240_04840 | Not Available | Negative | 1103382 - 1104203 | 29050.7 |
| hypothetical protein | CJ240_04845 | Not Available | Positive | 1104416 - 1105900 | 55045.1 |
| aspartate carbamoyltransferase | CJ240_04850 | Not Available | Negative | 1105989 - 1107029 | 38118.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
