Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid--coa ligase | CJ240_04755 | Not Available | Positive | 1084116 - 1086029 | 69018.6 |
| chorismate mutase | CJ240_04760 | Not Available | Negative | 1086087 - 1086407 | 12028.4 |
| atp-dependent clp protease atp-binding subunit clpx | CJ240_04765 | Not Available | Negative | 1086542 - 1087789 | 45285.4 |
| atp-dependent clp protease proteolytic subunit | CJ240_04770 | Not Available | Negative | 1087869 - 1088534 | 24373.1 |
| atp-dependent clp protease proteolytic subunit | CJ240_04775 | Not Available | Negative | 1088540 - 1089235 | 25191.2 |
| trigger factor | CJ240_04780 | Not Available | Negative | 1089414 - 1090766 | 50069.2 |
| hypothetical protein | CJ240_04785 | Not Available | Negative | 1090969 - 1092288 | 46948.7 |
| preprotein translocase subunit secg | CJ240_04790 | Not Available | Negative | 1092339 - 1092587 | 8590.93 |
| triose-phosphate isomerase | CJ240_04795 | Not Available | Negative | 1092717 - 1093490 | 27779.8 |
| phosphoglycerate kinase | CJ240_04800 | Not Available | Negative | 1093495 - 1094685 | 42060.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
