Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s4 | CJ240_04705 | Not Available | Negative | 1069529 - 1070152 | 23924.1 |
| aaa family atpase | CJ240_04710 | Not Available | Negative | 1070265 - 1071617 | 48343.9 |
| threonylcarbamoyl-amp synthase | CJ240_04715 | Not Available | Negative | 1071617 - 1072240 | 22629.8 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 1072354 - 1072704 | Not Available |
| long-chain fatty acid--coa ligase | CJ240_04725 | Not Available | Negative | 1072756 - 1074573 | 66351.4 |
| excinuclease abc subunit a | CJ240_04730 | Not Available | Negative | 1074699 - 1077533 | 104361.0 |
| hypothetical protein | CJ240_04735 | Not Available | Negative | 1077581 - 1078927 | 51091.7 |
| hypothetical protein | CJ240_04740 | Not Available | Positive | 1079145 - 1080191 | 39783.8 |
| hypothetical protein | CJ240_04745 | Not Available | Positive | 1080195 - 1081154 | 36413.6 |
| valine--trna ligase | CJ240_04750 | Not Available | Positive | 1081409 - 1084096 | 100815.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
