Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p | CJ240_04655 | Not Available | Negative | 1058754 - 1059317 | 21031.0 |
| hypothetical protein | CJ240_04660 | Not Available | Negative | 1059389 - 1059928 | 19421.5 |
| 3-dehydroquinate synthase | CJ240_04665 | Not Available | Negative | 1059933 - 1061627 | 59754.2 |
| chorismate synthase | CJ240_04670 | Not Available | Negative | 1061624 - 1062835 | 42850.4 |
| hypothetical protein | CJ240_04675 | Not Available | Negative | 1062925 - 1063575 | 23080.6 |
| shikimate dehydrogenase | CJ240_04680 | Not Available | Negative | 1063580 - 1064413 | 29345.6 |
| endolytic transglycosylase mltg | CJ240_04685 | Not Available | Negative | 1064401 - 1065657 | 45484.9 |
| holliday junction resolvase ruvx | CJ240_04690 | Not Available | Negative | 1065657 - 1066133 | 17052.5 |
| alanine--trna ligase | CJ240_04695 | Not Available | Negative | 1066133 - 1068814 | 98273.9 |
| duf948 domain-containing protein | CJ240_04700 | Not Available | Negative | 1069044 - 1069397 | 12373.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
