Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna methyltransferase | CJ240_04605 | Not Available | Negative | 1048877 - 1050391 | 54789.3 |
| methionyl-trna formyltransferase | CJ240_04610 | Not Available | Negative | 1050391 - 1051344 | 34398.2 |
| hypothetical protein | CJ240_04615 | Not Available | Negative | 1051387 - 1053465 | 75637.4 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | CJ240_04620 | Not Available | Negative | 1053462 - 1054673 | 42792.6 |
| dna-directed rna polymerase subunit omega | CJ240_04625 | Not Available | Negative | 1054681 - 1054956 | 9914.6 |
| guanylate kinase | CJ240_04630 | Not Available | Negative | 1055012 - 1055563 | 20116.9 |
| integration host factor mihf | CJ240_04635 | Not Available | Negative | 1055653 - 1055964 | 11332.9 |
| orotidine-5'-phosphate decarboxylase | CJ240_04640 | Not Available | Negative | 1056064 - 1056918 | 29447.0 |
| dihydroorotase | CJ240_04645 | Not Available | Negative | 1056928 - 1058226 | 46733.8 |
| transcription antitermination factor nusb | CJ240_04650 | Not Available | Negative | 1058298 - 1058747 | 16742.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
