Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ribulose-5-phosphate 4-epimerase | CJ240_04555 | Not Available | Positive | 1038920 - 1039630 | 25218.0 |
| rna polymerase-binding protein rbpa | CJ240_04560 | Not Available | Positive | 1039747 - 1040109 | 13822.2 |
| polyprenol monophosphomannose synthase | CJ240_04565 | Not Available | Negative | 1040211 - 1040948 | 26989.5 |
| apolipoprotein n-acyltransferase | CJ240_04570 | Not Available | Negative | 1040945 - 1042552 | 58773.3 |
| hypothetical protein | CJ240_04575 | Not Available | Negative | 1042537 - 1045335 | 101925.0 |
| hypothetical protein | CJ240_04580 | Not Available | Negative | 1045336 - 1045662 | 11787.6 |
| duf3866 domain-containing protein | CJ240_04585 | Not Available | Positive | 1045730 - 1046857 | 39862.8 |
| atp phosphoribosyltransferase | CJ240_04590 | Not Available | Negative | 1046944 - 1047789 | 30284.3 |
| phosphoribosyl-atp diphosphatase | CJ240_04595 | Not Available | Negative | 1047798 - 1048061 | 9799.68 |
| ribulose-phosphate 3-epimerase | CJ240_04600 | Not Available | Negative | 1048203 - 1048862 | 23600.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
