Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:alanine symporter family protein | CJ240_04505 | Not Available | Positive | 1025341 - 1026906 | 55655.4 |
| uracil-xanthine permease | CJ240_04510 | Not Available | Negative | 1026922 - 1028916 | 70597.0 |
| hypothetical protein | CJ240_04515 | Not Available | Positive | 1028934 - 1029245 | 11487.1 |
| transketolase | CJ240_04520 | Not Available | Positive | 1029371 - 1031470 | 75347.6 |
| ribose-5-phosphate isomerase | CJ240_04525 | Not Available | Positive | 1031562 - 1032053 | 17572.1 |
| hypothetical protein | CJ240_04530 | Not Available | Positive | 1032173 - 1033171 | 34905.2 |
| had family hydrolase | CJ240_04535 | Not Available | Positive | 1033247 - 1034107 | 32289.7 |
| xylulose kinase | CJ240_04540 | Not Available | Positive | 1034223 - 1035794 | 57553.2 |
| sn-glycerol-1-phosphate dehydrogenase | CJ240_04545 | Not Available | Positive | 1035822 - 1037183 | 49144.6 |
| ribulokinase | CJ240_04550 | Not Available | Positive | 1037245 - 1038909 | 59465.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
