Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyltetrahydrofolate deformylase | CJ240_04455 | Not Available | Negative | 1015683 - 1016537 | 32056.8 |
| fha domain-containing protein | CJ240_04460 | Not Available | Positive | 1016696 - 1017124 | 15387.2 |
| merr family transcriptional regulator | CJ240_04465 | Not Available | Positive | 1017085 - 1017894 | 29224.3 |
| transcriptional regulator | CJ240_04470 | Not Available | Positive | 1018034 - 1018549 | 18487.2 |
| sensor histidine kinase | CJ240_04475 | Not Available | Positive | 1018552 - 1019328 | 27951.7 |
| dna-binding response regulator | CJ240_04480 | Not Available | Positive | 1019325 - 1020020 | 25784.4 |
| glycerol-3-phosphate transporter | CJ240_04485 | Not Available | Positive | 1020149 - 1021531 | 50114.3 |
| abc transporter | CJ240_04490 | Not Available | Positive | 1021631 - 1022635 | 36417.7 |
| hypothetical protein | CJ240_04495 | Not Available | Positive | 1022632 - 1024128 | 53127.6 |
| abc transporter atp-binding protein | CJ240_04500 | Not Available | Positive | 1024110 - 1025186 | 38636.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
