Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell surface protein | CJ240_04350 | Not Available | Negative | 983810 - 987511 | 131779.0 |
| hypothetical protein | CJ240_04355 | Not Available | Positive | 987681 - 987941 | 9770.3 |
| type ii toxin-antitoxin system yafq family toxin | CJ240_04360 | Not Available | Negative | 987972 - 988253 | 10941.5 |
| type ii toxin-antitoxin system antitoxin, relb/dinj family | CJ240_04365 | Not Available | Negative | 988250 - 988525 | 10362.4 |
| hypothetical protein | CJ240_04375 | Not Available | Negative | 989956 - 990969 | 38886.4 |
| dna helicase | CJ240_04380 | Not Available | Negative | 991000 - 993846 | 108046.0 |
| restriction endonuclease | CJ240_04385 | Not Available | Negative | 993861 - 996827 | 112504.0 |
| site-specific dna-methyltransferase | CJ240_04390 | Not Available | Negative | 996843 - 998726 | 69747.6 |
| hypothetical protein | CJ240_04395 | Not Available | Positive | 999089 - 999805 | 27333.6 |
| hypothetical protein | CJ240_04400 | Not Available | Negative | 1000380 - 1001690 | 47929.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
