Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor/glpr transcriptional regulator | CJ240_04300 | Not Available | Negative | 971807 - 972586 | 28334.0 |
| glycerol-3-phosphate dehydrogenase | CJ240_04305 | Not Available | Negative | 972579 - 973625 | 36653.2 |
| xylulose kinase | CJ240_04310 | Not Available | Negative | 973641 - 975215 | 57438.3 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | CJ240_04315 | Not Available | Positive | 975497 - 977143 | 58014.6 |
| hypothetical protein | CJ240_04320 | Not Available | Positive | 977200 - 978222 | 37984.9 |
| 2-oxoglutarate dehydrogenase, e2 component, dihydrolipoamide succinyltransferase | CJ240_04325 | Not Available | Negative | 978400 - 980382 | 67666.2 |
| dihydrolipoyl dehydrogenase | CJ240_04330 | Not Available | Negative | 980407 - 981774 | 48192.0 |
| hypothetical protein | CJ240_04335 | Not Available | Positive | 982002 - 982490 | 17663.6 |
| trna (cytidine(34)-2'-o)-methyltransferase | CJ240_04340 | Not Available | Negative | 982487 - 982948 | 16881.5 |
| ybhb/ybcl family raf kinase inhibitor-like protein | CJ240_04345 | Not Available | Positive | 983079 - 983612 | 19110.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
