Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CJ240_04250 | Not Available | Negative | 957593 - 958186 | 21528.0 |
| mbl fold metallo-hydrolase | CJ240_04255 | Not Available | Negative | 958276 - 959031 | 27331.3 |
| duf349 domain-containing protein | CJ240_04260 | Not Available | Positive | 959163 - 960503 | 51093.2 |
| utp--glucose-1-phosphate uridylyltransferase | CJ240_04265 | Not Available | Positive | 960534 - 961913 | 49911.6 |
| atp-dependent rna helicase | CJ240_04270 | Not Available | Negative | 962028 - 963905 | 67658.8 |
| aspartate--trna ligase | CJ240_04275 | Not Available | Positive | 964071 - 965855 | 66139.1 |
| hypothetical protein | CJ240_04280 | Not Available | Negative | 965940 - 966977 | 37186.3 |
| hypothetical protein | CJ240_04285 | Not Available | Negative | 966941 - 967267 | 11959.4 |
| pyrroline-5-carboxylate reductase | CJ240_04290 | Not Available | Negative | 967364 - 968179 | 27912.8 |
| isoleucine--trna ligase | CJ240_04295 | Not Available | Positive | 968465 - 971731 | 122985.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
