Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yebc/pmpr family dna-binding transcriptional regulator | CJ240_04200 | Not Available | Positive | 947973 - 948100 | 4618.64 |
| yebc/pmpr family dna-binding transcriptional regulator | CJ240_04205 | Not Available | Positive | 948341 - 948791 | 16179.5 |
| crossover junction endodeoxyribonuclease ruvc | CJ240_04210 | Not Available | Positive | 948801 - 949439 | 23088.0 |
| holliday junction branch migration protein ruva | CJ240_04215 | Not Available | Positive | 949479 - 950078 | 20888.0 |
| holliday junction branch migration dna helicase ruvb | CJ240_04220 | Not Available | Positive | 950088 - 951212 | 40089.8 |
| preprotein translocase subunit yajc | CJ240_04225 | Not Available | Positive | 951259 - 951690 | 15236.4 |
| protein translocase subunit secd | CJ240_04230 | Not Available | Positive | 951733 - 953616 | 66865.7 |
| protein translocase subunit secf | CJ240_04235 | Not Available | Positive | 953613 - 954701 | 39179.0 |
| adenine phosphoribosyltransferase | CJ240_04240 | Not Available | Positive | 954698 - 955237 | 19122.5 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | CJ240_04245 | Not Available | Positive | 955322 - 957649 | 86372.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
