Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autonomous glycyl radical cofactor grca | CJ240_04150 | Not Available | Positive | 938290 - 938541 | 9524.44 |
| pyruvate formate-lyase 1-activating enzyme | CJ240_04155 | Not Available | Positive | 938656 - 939567 | 33505.1 |
| trna glutamyl-q(34) synthetase gluqrs | CJ240_04160 | Not Available | Negative | 939580 - 940524 | 34951.8 |
| threonine--trna ligase | CJ240_04165 | Not Available | Positive | 940618 - 942603 | 74167.3 |
| hit family hydrolase | CJ240_04170 | Not Available | Positive | 942607 - 943170 | 20633.4 |
| cdp-alcohol phosphatidyltransferase family protein | CJ240_04175 | Not Available | Positive | 943174 - 943788 | 21055.3 |
| phosphatidylinositol mannoside acyltransferase | CJ240_04180 | Not Available | Positive | 943789 - 944739 | 34674.3 |
| alpha-(1-2)-phosphatidylinositol mannosyltransferase | CJ240_04185 | Not Available | Positive | 944736 - 945845 | 39832.3 |
| prsw family intramembrane metalloprotease | CJ240_04190 | Not Available | Positive | 945954 - 947294 | 48334.4 |
| nudix hydrolase | CJ240_04195 | Not Available | Positive | 947245 - 947883 | 23878.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
