Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna methyltransferase erm | CJ240_04045 | Not Available | Positive | 915275 - 916129 | 31353.9 |
| hypothetical protein | CJ240_04055 | Not Available | Negative | 917102 - 917389 | 10463.4 |
| site-specific tyrosine recombinase xerd | CJ240_04060 | Not Available | Positive | 917514 - 918467 | 34358.9 |
| chromosome partitioning protein | CJ240_04065 | Not Available | Positive | 918815 - 919651 | 29998.3 |
| segregation/condensation protein a | CJ240_04070 | Not Available | Positive | 919575 - 920519 | 35075.0 |
| smc-scp complex subunit scpb | CJ240_04075 | Not Available | Positive | 920512 - 921084 | 20485.4 |
| rrna pseudouridine synthase | CJ240_04080 | Not Available | Positive | 921228 - 922010 | 28577.9 |
| prephenate dehydrogenase | CJ240_04085 | Not Available | Positive | 922020 - 923150 | 39019.1 |
| (d)cmp kinase | CJ240_04090 | Not Available | Positive | 923272 - 923982 | 24890.4 |
| ribosome biogenesis gtpase der | CJ240_04095 | Not Available | Positive | 924000 - 925460 | 53254.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
