Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | CJ240_03995 | Not Available | Positive | 901449 - 902960 | 57028.3 |
| zn(2+)-responsive transcriptional regulator | CJ240_04000 | Not Available | Negative | 903501 - 903905 | 15140.0 |
| sulp family inorganic anion transporter | CJ240_04005 | Not Available | Positive | 904075 - 905634 | 54878.2 |
| hypothetical protein | CJ240_04010 | Not Available | Negative | 905804 - 906280 | 17243.1 |
| putative dna-binding protein | CJ240_04015 | Not Available | Positive | 906442 - 906849 | 14787.8 |
| duf4192 domain-containing protein | CJ240_04020 | Not Available | Positive | 907020 - 908042 | 36696.6 |
| single-stranded dna-binding protein | CJ240_04025 | Not Available | Positive | 908438 - 908863 | 14784.3 |
| hypothetical protein | CJ240_04030 | Not Available | Negative | 909433 - 910779 | 51472.4 |
| hypothetical protein | CJ240_04035 | Not Available | Negative | 912308 - 912607 | 10872.0 |
| dna-binding protein | CJ240_04040 | Not Available | Negative | 912779 - 913087 | 11278.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
