Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter | CJ240_03945 | Not Available | Positive | 890914 - 892512 | 57221.5 |
| isoprenyl transferase | CJ240_03950 | Not Available | Negative | 892517 - 893281 | 28894.5 |
| hemolysin | CJ240_03955 | Not Available | Positive | 893462 - 894124 | 24323.5 |
| transcription elongation factor grea | CJ240_03960 | Not Available | Positive | 894263 - 894739 | 17849.1 |
| hypothetical protein | CJ240_03965 | Not Available | Negative | 894783 - 896258 | 54625.0 |
| exodeoxyribonuclease vii small subunit | CJ240_03970 | Not Available | Negative | 896261 - 896476 | 7959.33 |
| exodeoxyribonuclease vii large subunit | CJ240_03975 | Not Available | Negative | 896486 - 897721 | 44680.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CJ240_03980 | Not Available | Positive | 897832 - 898836 | 36555.5 |
| hypothetical protein | CJ240_03985 | Not Available | Positive | 898845 - 900290 | 52046.6 |
| redox-regulated atpase ychf | CJ240_03990 | Not Available | Positive | 900349 - 901428 | 39301.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
