Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | CJ240_03895 | Not Available | Positive | 882124 - 882885 | 26053.2 |
| cystathionine beta-lyase | CJ240_03900 | Not Available | Negative | 882916 - 884100 | 43407.9 |
| glutamate--trna ligase | CJ240_03905 | Not Available | Positive | 884274 - 885806 | 56594.6 |
| Trna-gln | Not Available | Not Available | Positive | 885908 - 885982 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 886012 - 886087 | Not Available |
| histidine--trna ligase | CJ240_03920 | Not Available | Positive | 886183 - 887487 | 47625.2 |
| na+/h+ antiporter nhaa | CJ240_03925 | Not Available | Negative | 887562 - 888935 | 48553.9 |
| Trna-leu | Not Available | Not Available | Positive | 889088 - 889164 | Not Available |
| bax1 inhibitor-like family protein | CJ240_03935 | Not Available | Positive | 889318 - 890235 | 32621.4 |
| hypothetical protein | CJ240_03940 | Not Available | Positive | 890309 - 890806 | 18457.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
