Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease | CJ240_03845 | Not Available | Negative | 869224 - 869790 | 20543.2 |
| phosphoenolpyruvate carboxykinase (gtp) | CJ240_03850 | Not Available | Positive | 870096 - 871943 | 68805.8 |
| hypothetical protein | CJ240_03855 | Not Available | Negative | 872179 - 872436 | 9409.34 |
| hypothetical protein | CJ240_03860 | Not Available | Positive | 872591 - 872854 | 9786.32 |
| potassium transporter | CJ240_03865 | Not Available | Negative | 872956 - 873690 | 26084.6 |
| atpase | CJ240_03870 | Not Available | Negative | 873617 - 874861 | 43966.9 |
| hypothetical protein | CJ240_03875 | Not Available | Positive | 875193 - 877646 | 89725.0 |
| hypothetical protein | CJ240_03880 | Not Available | Negative | 877731 - 878621 | 31370.8 |
| nitroreductase | CJ240_03885 | Not Available | Negative | 878707 - 879276 | 21915.1 |
| atp-dependent helicase | CJ240_03890 | Not Available | Negative | 879387 - 882068 | 98925.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
