Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i dna topoisomerase | CJ240_00055 | Not Available | Positive | 9791 - 12520 | 100260.0 |
| hypothetical protein | CJ240_00060 | Not Available | Negative | 12703 - 14052 | 47343.9 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | CJ240_00065 | Not Available | Negative | 14208 - 14918 | 25538.6 |
| ribonucleoside triphosphate reductase | CJ240_00070 | Not Available | Negative | 14947 - 16752 | 67737.8 |
| phosphatase pap2 family protein | CJ240_00075 | Not Available | Negative | 17021 - 17935 | 32988.2 |
| helicase | CJ240_00080 | Not Available | Positive | 18038 - 20482 | 88891.7 |
| hypothetical protein | CJ240_00085 | Not Available | Negative | 20493 - 20873 | 12788.3 |
| hypothetical protein | CJ240_00090 | Not Available | Negative | 20870 - 21205 | 11052.4 |
| duf4244 domain-containing protein | CJ240_00095 | Not Available | Negative | 21276 - 21488 | 7367.17 |
| aspartate aminotransferase family protein | CJ240_00100 | Not Available | Positive | 21636 - 23054 | 49742.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
