Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CJ240_03790 | Not Available | Negative | 855220 - 855648 | 15454.0 |
| tetr family transcriptional regulator | CJ240_03800 | Not Available | Negative | 857430 - 858131 | 26698.4 |
| mfs transporter | CJ240_03805 | Not Available | Positive | 858225 - 859448 | 43080.6 |
| duf4357 domain-containing protein | CJ240_03810 | Not Available | Positive | 859769 - 860326 | 20194.2 |
| isoprenylcysteine carboxylmethyltransferase family protein | CJ240_03815 | Not Available | Positive | 860377 - 860868 | 18395.8 |
| hypothetical protein | CJ240_03820 | Not Available | Negative | 860878 - 863190 | 83086.0 |
| abc transporter atp-binding protein | CJ240_03825 | Not Available | Negative | 863359 - 865158 | 65020.3 |
| abc transporter atp-binding protein | CJ240_03830 | Not Available | Negative | 865127 - 866809 | 60736.4 |
| abc transporter | CJ240_03835 | Not Available | Negative | 866955 - 868418 | 52554.9 |
| energy-coupling factor transporter transmembrane protein ecft | CJ240_03840 | Not Available | Negative | 868415 - 869224 | 29544.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
