Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system phd/yefm family antitoxin | CJ240_03735 | Not Available | Negative | 847946 - 848152 | 7762.35 |
| abc transporter permease | CJ240_03740 | Not Available | Negative | 848713 - 849492 | 28406.1 |
| abc transporter atp-binding protein | CJ240_03745 | Not Available | Negative | 849489 - 850322 | 28984.4 |
| hypothetical protein | CJ240_03750 | Not Available | Negative | 850325 - 850651 | 12326.6 |
| hypothetical protein | CJ240_03755 | Not Available | Negative | 850648 - 851343 | 25228.0 |
| padr family transcriptional regulator | CJ240_03760 | Not Available | Negative | 851343 - 851669 | 12044.8 |
| gntr family transcriptional regulator | CJ240_03765 | Not Available | Positive | 851901 - 852284 | 13852.5 |
| abc transporter atp-binding protein | CJ240_03770 | Not Available | Positive | 852271 - 853116 | 30875.0 |
| abc-2 transporter permease | CJ240_03775 | Not Available | Positive | 853140 - 853742 | 21768.6 |
| hypothetical protein | CJ240_03785 | Not Available | Negative | 854669 - 855052 | 14414.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
