Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2815 domain-containing protein | CJ240_03685 | Not Available | Negative | 834946 - 835500 | 19668.1 |
| duf2800 domain-containing protein | CJ240_03690 | Not Available | Negative | 835507 - 836664 | 42453.0 |
| hypothetical protein | CJ240_03695 | Not Available | Negative | 836657 - 837067 | 14166.5 |
| hypothetical protein | CJ240_03700 | Not Available | Negative | 837064 - 837309 | 8732.91 |
| sigma-70 family rna polymerase sigma factor | CJ240_03705 | Not Available | Negative | 837315 - 838055 | 27255.0 |
| imma/irre family metallo-endopeptidase | CJ240_03710 | Not Available | Negative | 838568 - 840166 | 60394.1 |
| m48 family peptidase | CJ240_03715 | Not Available | Negative | 840129 - 840875 | 29098.1 |
| restriction endonuclease subunit r | CJ240_03720 | Not Available | Negative | 840868 - 844020 | 120442.0 |
| restriction endonuclease subunit s | CJ240_03725 | Not Available | Negative | 844017 - 845258 | 46095.9 |
| n-6 dna methylase | CJ240_03730 | Not Available | Negative | 845252 - 847921 | 99952.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
