Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2283 domain-containing protein | CJ240_03635 | Not Available | Negative | 824792 - 825025 | 8351.93 |
| duf4258 domain-containing protein | CJ240_03640 | Not Available | Negative | 825047 - 825508 | 16321.0 |
| hypothetical protein | CJ240_03645 | Not Available | Negative | 825782 - 826243 | 17616.8 |
| atp-dependent helicase | CJ240_03650 | Not Available | Negative | 826256 - 827614 | 50643.0 |
| vrr-nuc domain-containing protein | CJ240_03655 | Not Available | Negative | 827595 - 827873 | 9980.27 |
| dna primase | CJ240_03660 | Not Available | Negative | 828001 - 830256 | 83950.1 |
| duf4406 domain-containing protein | CJ240_03665 | Not Available | Negative | 830256 - 830696 | 16476.5 |
| phage antirepressor | CJ240_03670 | Not Available | Negative | 830696 - 831475 | 29017.0 |
| caax protease | CJ240_03675 | Not Available | Positive | 831949 - 832902 | 36008.6 |
| dna polymerase | CJ240_03680 | Not Available | Negative | 832899 - 834869 | 72578.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
