Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | CJ240_03425 | Not Available | Negative | 789557 - 790366 | 29279.1 |
| metal abc transporter substrate-binding protein | CJ240_03580 | Not Available | Positive | 815317 - 816255 | 33984.1 |
| metal abc transporter atp-binding protein | CJ240_03585 | Not Available | Positive | 816252 - 817058 | 28472.1 |
| zinc abc transporter permease | CJ240_03590 | Not Available | Positive | 817055 - 817948 | 31949.1 |
| dna modification methylase | CJ240_03605 | Not Available | Negative | 819652 - 820908 | 46461.4 |
| methionine adenosyltransferase | CJ240_03610 | Not Available | Negative | 820880 - 822070 | 43060.1 |
| hypothetical protein | CJ240_03615 | Not Available | Positive | 822177 - 822389 | 7036.57 |
| terminase | CJ240_03620 | Not Available | Negative | 822414 - 822986 | 20838.7 |
| hypothetical protein | CJ240_03625 | Not Available | Negative | 823016 - 823993 | 35570.7 |
| hnh endonuclease | CJ240_03630 | Not Available | Negative | 824248 - 824625 | 14598.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
