Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pup--protein ligase | CJ240_03225 | Not Available | Positive | 751886 - 753268 | 51059.9 |
| hypothetical protein | CJ240_03230 | Not Available | Positive | 753274 - 754317 | 36986.3 |
| imidazole glycerol phosphate synthase subunit hisf | CJ240_03235 | Not Available | Positive | 754440 - 755210 | 26797.0 |
| phosphoribosyl-amp cyclohydrolase | CJ240_03240 | Not Available | Positive | 755207 - 755584 | 13711.1 |
| indole-3-glycerol phosphate synthase trpc | CJ240_03245 | Not Available | Positive | 755637 - 756479 | 30107.1 |
| prolipoprotein diacylglyceryl transferase | CJ240_03250 | Not Available | Positive | 756491 - 757372 | 33199.9 |
| pyruvate kinase | CJ240_03255 | Not Available | Positive | 757440 - 758864 | 51114.4 |
| hypothetical protein | CJ240_03260 | Not Available | Positive | 759158 - 759364 | 7469.88 |
| nitroreductase | CJ240_03265 | Not Available | Negative | 759553 - 760074 | 19818.6 |
| hypothetical protein | CJ240_03270 | Not Available | Negative | 760173 - 760364 | 7182.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
