Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | CJ240_00010 | Not Available | Negative | 759 - 1984 | 46054.8 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2059 - 5131 | Not Available |
| transposase family protein | CJ240_00015 | Not Available | Positive | 2141 - 2452 | 11333.0 |
| Trna-lys | Not Available | Not Available | Positive | 2848 - 2923 | Not Available |
| formate-dependent phosphoribosylglycinamide formyltransferase | CJ240_00030 | Not Available | Positive | 3068 - 4282 | 43517.2 |
| lsr2 family protein | CJ240_00035 | Not Available | Positive | 4524 - 4847 | 12116.5 |
| phosphoglyceromutase | CJ240_00040 | Not Available | Positive | 4901 - 5635 | 27740.9 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 5299 - 5415 | Not Available |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | CJ240_00045 | Not Available | Positive | 5971 - 7104 | 41129.5 |
| hypothetical protein | CJ240_00050 | Not Available | Negative | 7337 - 9103 | 63748.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
