Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine deiminase | CJ240_03020 | Not Available | Positive | 708598 - 709827 | 45434.2 |
| ornithine carbamoyltransferase | CJ240_03025 | Not Available | Positive | 709878 - 710882 | 37402.5 |
| tigr01457 family had-type hydrolase | CJ240_03030 | Not Available | Negative | 710972 - 711763 | 28407.9 |
| hypothetical protein | CJ240_03035 | Not Available | Negative | 711931 - 712884 | 34179.5 |
| hypothetical protein | CJ240_03040 | Not Available | Negative | 713069 - 713797 | 26642.2 |
| abc transporter atp-binding protein | CJ240_03045 | Not Available | Positive | 713948 - 715612 | 60816.5 |
| hypothetical protein | CJ240_03050 | Not Available | Negative | 715665 - 715892 | 8477.06 |
| histidine phosphatase | CJ240_03055 | Not Available | Positive | 715944 - 716432 | 17039.5 |
| glucose-1-phosphate adenylyltransferase | CJ240_03060 | Not Available | Negative | 716549 - 717784 | 45476.0 |
| glycogen synthase | CJ240_03065 | Not Available | Positive | 718054 - 719259 | 44115.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
