Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CJ240_02970 | Not Available | Positive | 699215 - 700879 | 57731.0 |
| adp-ribose diphosphatase | CJ240_02975 | Not Available | Positive | 700912 - 701580 | 24740.2 |
| transcriptional regulator | CJ240_02980 | Not Available | Positive | 701771 - 702463 | 24610.3 |
| fe-s cluster assembly protein sufb | CJ240_02985 | Not Available | Positive | 702501 - 703955 | 54125.9 |
| fe-s cluster assembly protein sufd | CJ240_02990 | Not Available | Positive | 703955 - 705136 | 43392.2 |
| non-heme iron oxygenase ferredoxin subunit | CJ240_02995 | Not Available | Positive | 705133 - 705477 | 12115.2 |
| fe-s cluster assembly atpase sufc | CJ240_03000 | Not Available | Positive | 705478 - 706224 | 26834.1 |
| cysteine desulfurase | CJ240_03005 | Not Available | Positive | 706278 - 707546 | 45562.3 |
| suf system nifu family fe-s cluster assembly protein | CJ240_03010 | Not Available | Positive | 707546 - 708007 | 16689.6 |
| metal-sulfur cluster biosynthetic enzyme | CJ240_03015 | Not Available | Positive | 708000 - 708554 | 19932.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
