Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CJ240_02920 | Not Available | Positive | 687682 - 688644 | 34786.5 |
| glycerol-3-phosphate dehydrogenase | CJ240_02925 | Not Available | Positive | 688686 - 689747 | 37777.2 |
| hydrolase | CJ240_02930 | Not Available | Positive | 690669 - 692585 | 67122.8 |
| hypothetical protein | CJ240_02935 | Not Available | Positive | 692575 - 692772 | 7102.23 |
| tlya family rrna (cytidine-2'-o)-methyltransferase | CJ240_02940 | Not Available | Positive | 692775 - 693611 | 29771.8 |
| nad kinase | CJ240_02945 | Not Available | Positive | 693633 - 694466 | 29647.7 |
| dna repair protein recn | CJ240_02950 | Not Available | Positive | 694470 - 696155 | 59859.2 |
| hypothetical protein | CJ240_02955 | Not Available | Positive | 696165 - 697361 | 42648.8 |
| hypothetical protein | CJ240_02960 | Not Available | Positive | 697378 - 698304 | 32192.5 |
| hypothetical protein | CJ240_02965 | Not Available | Positive | 698304 - 699218 | 30544.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
