Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hg(ii)-responsive transcriptional regulator | CJ240_02865 | Not Available | Negative | 674270 - 674662 | 15561.9 |
| tetr/acrr family transcriptional regulator | CJ240_02875 | Not Available | Positive | 675366 - 675953 | 22123.8 |
| duf2871 domain-containing protein | CJ240_02880 | Not Available | Positive | 676036 - 676452 | 15257.4 |
| zinc abc transporter substrate-binding protein | CJ240_02885 | Not Available | Positive | 676634 - 677584 | 34640.1 |
| zinc abc transporter atp-binding protein | CJ240_02890 | Not Available | Positive | 677577 - 678242 | 24207.4 |
| metal abc transporter permease | CJ240_02895 | Not Available | Positive | 678239 - 679030 | 27757.4 |
| hypothetical protein | CJ240_02900 | Not Available | Positive | 679040 - 680482 | 52189.1 |
| aconitate hydratase acna | CJ240_02905 | Not Available | Positive | 680775 - 683477 | 97831.2 |
| chloride channel protein | CJ240_02910 | Not Available | Negative | 683768 - 685624 | 65487.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | CJ240_02915 | Not Available | Positive | 685664 - 687535 | 66775.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
