Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CJ240_02815 | Not Available | Positive | 663499 - 664230 | 25979.1 |
| hypothetical protein | CJ240_02820 | Not Available | Positive | 664230 - 664562 | 11442.7 |
| duf3159 domain-containing protein | CJ240_02825 | Not Available | Positive | 664555 - 665301 | 27435.6 |
| trka family potassium uptake protein | CJ240_02830 | Not Available | Negative | 665298 - 665999 | 25000.8 |
| trka family potassium uptake protein | CJ240_02835 | Not Available | Negative | 666001 - 666666 | 24701.4 |
| apc family permease | CJ240_02840 | Not Available | Positive | 666745 - 668925 | 79614.9 |
| class i sam-dependent rna methyltransferase | CJ240_02845 | Not Available | Positive | 668943 - 670343 | 49766.1 |
| hypothetical protein | CJ240_02850 | Not Available | Positive | 670619 - 670798 | 6511.39 |
| isl3 family transposase | CJ240_02855 | Not Available | Negative | 671119 - 672441 | 52603.2 |
| mercury(ii) reductase | CJ240_02860 | Not Available | Negative | 672601 - 674241 | 58742.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
