Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CJ240_02715 | Not Available | Positive | 638543 - 639529 | 34559.0 |
| superoxide dismutase | CJ240_02720 | Not Available | Negative | 639733 - 640359 | 23148.2 |
| hypothetical protein | CJ240_02725 | Not Available | Positive | 640621 - 641007 | 14295.1 |
| endonuclease | CJ240_02730 | Not Available | Negative | 641058 - 642869 | 66852.0 |
| hypothetical protein | CJ240_02735 | Not Available | Negative | 642866 - 643267 | 14979.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | CJ240_02740 | Not Available | Positive | 643330 - 644151 | 29787.1 |
| pyrophosphate--fructose-6-phosphate 1-phosphotransferase | CJ240_02745 | Not Available | Positive | 644385 - 645596 | 44070.6 |
| 3-deoxy-7-phosphoheptulonate synthase class ii | CJ240_02750 | Not Available | Positive | 645863 - 647269 | 51980.2 |
| serine/threonine protein kinase | CJ240_02755 | Not Available | Negative | 647343 - 649454 | 75789.8 |
| hypothetical protein | CJ240_02760 | Not Available | Positive | 649539 - 649880 | 12365.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
