Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CJ240_05835 | Not Available | Positive | 1310366 - 1310722 | 12724.5 |
| hypothetical protein | CJ240_05840 | Not Available | Positive | 1310777 - 1311166 | 14265.4 |
| Endolysin | CJ240_05845 | Not Available | Positive | 1311356 - 1312207 | 30609.3 |
| Holin | CJ240_05850 | Not Available | Positive | 1312225 - 1312491 | 9220.18 |
| Minor tail protein | CJ240_05855 | Not Available | Positive | 1312505 - 1313038 | 19412.1 |
| Attr | Not Available | Not Available | Positive | 1312893 - 1312906 | Not Available |
| Integrase | CJ240_05860 | Not Available | Negative | 1313035 - 1313997 | 35998.9 |
| Hypothetical protein | CJ240_05865 | Not Available | Negative | 1313886 - 1314734 | 31908.3 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 222 - 1770 | Not Available |
| hypothetical protein | CJ240_00005 | Not Available | Negative | 202 - 600 | 14765.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
