Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CJ240_02610 | Not Available | Negative | 612169 - 612519 | 12286.1 |
| Trna-val | Not Available | Not Available | Positive | 612805 - 612881 | Not Available |
| gtpase hflx | CJ240_02620 | Not Available | Positive | 613102 - 614649 | 56378.9 |
| atp-dependent helicase | CJ240_02625 | Not Available | Positive | 614650 - 616644 | 71615.1 |
| l-lactate dehydrogenase | CJ240_02630 | Not Available | Positive | 616780 - 617772 | 35076.3 |
| histidine kinase | CJ240_02635 | Not Available | Negative | 617799 - 619592 | 63998.7 |
| thiol reductant abc exporter subunit cydc | CJ240_02640 | Not Available | Negative | 619582 - 621393 | 64329.1 |
| thiol reductant abc exporter subunit cydd | CJ240_02645 | Not Available | Negative | 621394 - 623175 | 63682.1 |
| cytochrome d ubiquinol oxidase subunit ii | CJ240_02650 | Not Available | Negative | 623573 - 624709 | 41020.6 |
| cytochrome ubiquinol oxidase subunit i | CJ240_02655 | Not Available | Negative | 624731 - 626266 | 56411.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
