Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pdz domain-containing protein | CJ240_02560 | Not Available | Positive | 600676 - 601971 | 45798.5 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | CJ240_02565 | Not Available | Positive | 602128 - 603258 | 39917.2 |
| proline--trna ligase | CJ240_02570 | Not Available | Positive | 603631 - 605499 | 68456.0 |
| peptide deformylase | CJ240_02575 | Not Available | Positive | 605502 - 605993 | 18436.9 |
| duf3145 domain-containing protein | CJ240_02580 | Not Available | Positive | 606435 - 606932 | 18365.6 |
| acyl carrier protein | CJ240_02585 | Not Available | Positive | 606934 - 607368 | 15415.5 |
| hypothetical protein | CJ240_02590 | Not Available | Positive | 607475 - 607936 | 16431.9 |
| duf4298 domain-containing protein | CJ240_02595 | Not Available | Negative | 608110 - 608451 | 12737.6 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | CJ240_02600 | Not Available | Negative | 608673 - 611420 | 102916.0 |
| duf3052 domain-containing protein | CJ240_02605 | Not Available | Positive | 611776 - 612156 | 13856.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
