Varibaculum cambriense strain UMB0744

Gram-positiveFacultative anaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Varibaculum

Description

Varibaculum cambriense strain UMB0744 is a Gram-positive bacterium primarily inhabiting the vaginal mucosa. This organism is classified as a facultative anaerobe, meaning it can thrive in both aerobic and anaerobic environments. The strain is characterized by having a single replicon, which is indicative of its genetic organization. The accession number for Varibaculum cambriense strain UMB0744 is PNGC00000000.1, allowing for further reference and study of its genetic material. The presence of Varibaculum cambriense in the vaginal mucosa suggests it may play a role in the complex microbial ecosystem of this niche. The vaginal microbiome is crucial for maintaining health, influencing factors such as pH and the presence of pathogenic organisms. Understanding the ecological role of Varibaculum cambriense, particularly its interactions with other microbial species and its response to varying oxygen levels, could provide insights into its function in maintaining vaginal health and potentially preventing infections. Further research on this strain may elucidate its contributions to the microbial balance within the vaginal environment and its implications for women's health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusVaribaculum
SpeciesVaribaculum cambriense
Strainstrain UMB0744

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatvaginal mucosa
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Varibaculum cambriense strain UMB0744 ERR1203609.17957_1_21.7,

Gene Summary

Adenine Count

476439 bp

Thymine Count

468567 bp

Guanine Count

551316 bp

Cytosine Count

537929 bp

Genome Length

2036040 bp

Protein-coding Genes

1706 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pdz domain-containing proteinCJ240_02560Not AvailablePositive600676 - 60197145798.5
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseCJ240_02565Not AvailablePositive602128 - 60325839917.2
proline--trna ligaseCJ240_02570Not AvailablePositive603631 - 60549968456.0
peptide deformylaseCJ240_02575Not AvailablePositive605502 - 60599318436.9
duf3145 domain-containing proteinCJ240_02580Not AvailablePositive606435 - 60693218365.6
acyl carrier proteinCJ240_02585Not AvailablePositive606934 - 60736815415.5
hypothetical proteinCJ240_02590Not AvailablePositive607475 - 60793616431.9
duf4298 domain-containing proteinCJ240_02595Not AvailableNegative608110 - 60845112737.6
pyruvate dehydrogenase (acetyl-transferring), homodimeric typeCJ240_02600Not AvailableNegative608673 - 611420102916.0
duf3052 domain-containing proteinCJ240_02605Not AvailablePositive611776 - 61215613856.9

Displaying genes 571 – 580 of 1797 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.