Varibaculum cambriense strain UMB0744

Gram-positiveFacultative anaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Varibaculum

Description

Varibaculum cambriense strain UMB0744 is a Gram-positive bacterium primarily inhabiting the vaginal mucosa. This organism is classified as a facultative anaerobe, meaning it can thrive in both aerobic and anaerobic environments. The strain is characterized by having a single replicon, which is indicative of its genetic organization. The accession number for Varibaculum cambriense strain UMB0744 is PNGC00000000.1, allowing for further reference and study of its genetic material. The presence of Varibaculum cambriense in the vaginal mucosa suggests it may play a role in the complex microbial ecosystem of this niche. The vaginal microbiome is crucial for maintaining health, influencing factors such as pH and the presence of pathogenic organisms. Understanding the ecological role of Varibaculum cambriense, particularly its interactions with other microbial species and its response to varying oxygen levels, could provide insights into its function in maintaining vaginal health and potentially preventing infections. Further research on this strain may elucidate its contributions to the microbial balance within the vaginal environment and its implications for women's health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusVaribaculum
SpeciesVaribaculum cambriense
Strainstrain UMB0744

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatvaginal mucosa
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Varibaculum cambriense strain UMB0744 ERR1203609.17957_1_21.7,

Gene Summary

Adenine Count

476439 bp

Thymine Count

468567 bp

Guanine Count

551316 bp

Cytosine Count

537929 bp

Genome Length

2036040 bp

Protein-coding Genes

1706 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
recombinase xercCJ240_02510Not AvailablePositive591336 - 59227134508.6
m23 family peptidaseCJ240_02515Not AvailableNegative592425 - 59296719040.2
30s ribosomal protein s2CJ240_02520Not AvailablePositive593387 - 59426832287.4
elongation factor tsCJ240_02525Not AvailablePositive594303 - 59513929960.9
ump kinaseCJ240_02530Not AvailablePositive595311 - 59606026563.1
ribosome recycling factorCJ240_02535Not AvailablePositive596065 - 59662220815.9
phosphatidate cytidylyltransferaseCJ240_02540Not AvailablePositive596668 - 59751329466.4
dual-specificity rna methyltransferase rlmnCJ240_02545Not AvailablePositive597691 - 59886042560.2
diviva domain-containing proteinCJ240_02550Not AvailablePositive598853 - 59940420572.0
1-deoxy-d-xylulose-5-phosphate reductoisomeraseCJ240_02555Not AvailablePositive599458 - 60067242468.6

Displaying genes 561 – 570 of 1797 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.