Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | strain UMB0744 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase xerc | CJ240_02510 | Not Available | Positive | 591336 - 592271 | 34508.6 |
| m23 family peptidase | CJ240_02515 | Not Available | Negative | 592425 - 592967 | 19040.2 |
| 30s ribosomal protein s2 | CJ240_02520 | Not Available | Positive | 593387 - 594268 | 32287.4 |
| elongation factor ts | CJ240_02525 | Not Available | Positive | 594303 - 595139 | 29960.9 |
| ump kinase | CJ240_02530 | Not Available | Positive | 595311 - 596060 | 26563.1 |
| ribosome recycling factor | CJ240_02535 | Not Available | Positive | 596065 - 596622 | 20815.9 |
| phosphatidate cytidylyltransferase | CJ240_02540 | Not Available | Positive | 596668 - 597513 | 29466.4 |
| dual-specificity rna methyltransferase rlmn | CJ240_02545 | Not Available | Positive | 597691 - 598860 | 42560.2 |
| diviva domain-containing protein | CJ240_02550 | Not Available | Positive | 598853 - 599404 | 20572.0 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | CJ240_02555 | Not Available | Positive | 599458 - 600672 | 42468.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
